Information for 14-CCCTTTGTCCTCT (Motif 12)

A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T
Reverse Opposite:
C G T A C T A G C T G A A C T G T C A G C G T A T G A C G T C A C G T A G C T A C T A G C T A G A T C G
p-value:1e-9
log p-value:-2.093e+01
Information Content per bp:1.744
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif120.9
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets39.8 +/- 27.6bp
Average Position of motif in Background51.6 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCCTCT
-CCTTTGTTTT--
 A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCCTCT
-YCTTTGTTCC--
 A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCCTCT
-CCTTTGTT----
 A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCCTCT
-CCATTGTTTT--
 A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCCTTTGTCCTCT
NCCATTGTTC---
 A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCCTCT
-CCWTTGTY----
 A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTTGTCCTCT-
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCCTTTGTCCTCT
-CCWTTGTYYB--
 A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTTGTCCTCT-
WCATTTTGKCCTCYT
 A C G T A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTTGTCCTCT-
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A T G C A G T C G A T C C A G T A C G T A C G T A C T G A C G T A G T C G T A C A G C T A G T C G A C T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T