Information for 6-GTGGCTGCGGTTA (Motif 9)

A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A
Reverse Opposite:
G A C T C G T A C G T A A T G C A G T C A T C G A G T C C G T A A C T G G T A C A G T C C G T A A G T C
p-value:1e-12
log p-value:-2.968e+01
Information Content per bp:1.827
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.1 +/- 22.5bp
Average Position of motif in Background50.8 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTGGCTGCGGTTA
---GCTGTGGTTT
 A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GTGGCTGCGGTTA
----TTGCGGTTT
 A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GTGGCTGCGGTTA-
----CTGTGGTTTN
 A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A A C G T
A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTGGCTGCGGTTA
--GTCTGTGGTTT
 A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A
A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTGGCTGCGGTTA
TWGTCTGV-----
 A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTGGCTGCGGTTA
---NNTGTGGTTT
 A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A
A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTGGCTGCGGTTA
---TTTGCGGTTT
 A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A
A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTGGCTGCGGTTA
--TGCTGTGATTT
 A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTGGCTGCGGTTA-
--NNHTGTGGTTWN
 A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGGCTGCGGTTA
CTGTCTGG-----
 A C T G C G A T A C T G A C T G A G T C A C G T A C T G T A G C C T A G A T C G A C G T A C G T C T G A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T