Information for 19-GCGGCTCTAT (Motif 30)

A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G C G T A A C T G A G T C G A T C C T A G G T A C
p-value:1e-6
log p-value:-1.455e+01
Information Content per bp:1.854
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif24.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets50.3 +/- 26.6bp
Average Position of motif in Background52.9 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCGGCTCTAT----
--GGCTCYAKCAYC
 A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCGGCTCTAT
--NGCTN---
 A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCGGCTCTAT-----
ANNNGGATATATCCNNN
 A C G T A C G T A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCTCTAT------
NGCTGCGATATCGNCGC
 A C G T A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCGGCTCTAT--
GGNGCGNCTGTTNNN
 A C G T A C G T A C G T A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCGGCTCTAT
CAGCAGCTGN--
 A C G T A C G T A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCGGCTCTAT
NNAGCAGCTGCT-
 A C G T A C G T A C G T A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCGGCTCTAT
NNGCAGCTGTT-
 A C G T A C G T A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCGGCTCTAT--
AGGTCTCTAACC
 A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCGGCTCTAT
GCAGCTGTNN
 A C T G A G T C C T A G A C T G A G T C A C G T A G T C A C G T T G C A A C G T
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T