Information for 17-CCGAAGGCTCTCC (Motif 26)

A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G G T C A A C T G C G T A A C T G A G T C A G T C A C G T A G C T A G T C A C T G A C T G
p-value:1e-7
log p-value:-1.783e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 34.5bp
Average Position of motif in Background57.7 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGAAGGCTCTCC
AGCCTCAGGCA----
 A C G T A C G T A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGAAGGCTCTCC
AGCCTCAGGCA----
 A C G T A C G T A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCGAAGGCTCTCC
CGCCTCAGGCA----
 A C G T A C G T A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGAAGGCTCTCC
ATTGCCTCAGGCAAT--
 A C G T A C G T A C G T A C G T A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCGAAGGCTCTCC--
----AGCCACTCAAG
 A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCGAAGGCTCTCC-
----AASCACTCAA
 A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCGAAGGCTCTCC
NTNGCCTCAGGCNNN--
 A C G T A C G T A C G T A C G T A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCGAAGGCTCTCC
TGCCCCCGGGCA----
 A C G T A C G T A C G T A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CCGAAGGCTCTCC
TGCCCCAGGGCA----
 A C G T A C G T A C G T A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCGAAGGCTCTCC
TGCCCCAGGGCA----
 A C G T A C G T A C G T A G T C A G T C C T A G C T G A C G T A C T A G A C T G A G T C C G A T A G T C A C G T A G T C A G T C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T