Information for 16-TTGGCTGCAC (Motif 24)

A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C
Reverse Opposite:
A C T G A G C T A C T G A T G C C G T A A C T G A G T C A T G C G C T A T G C A
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.855
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif95.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets48.6 +/- 28.0bp
Average Position of motif in Background53.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGGCTGCAC
TWGTCTGV--
 A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTGGCTGCAC
--NGCTN---
 A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGGCTGCAC
TTGGCA----
 A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCTGCAC
NTTGGCANN--
 A C G T A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCTGCAC
TGATTGGCTANN-
 A C G T A C G T A C G T A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTGGCTGCAC
---GCTTCC-
 A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

PAX5/MA0014.2/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------TTGGCTGCAC--
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C A C G T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCTGCAC
CCGATTGGCT----
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCTGCAC-----
NTNTATGTGCACATNNN
 A C G T A C G T A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTGGCTGCAC
---GCTGTG-
 A C G T C G A T A T C G A C T G A G T C A C G T A T C G A G T C T C G A A G T C
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T