Information for 13-CTCCGGCAGGGGC (Motif 19)

A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A G T C A C G T A C T G A G T C G T A C A T C G T C A G C G T A A C T G
p-value:1e-10
log p-value:-2.393e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.7 +/- 19.3bp
Average Position of motif in Background63.3 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTCCGGCAGGGGC--
---SDGCAGGTGCNS
 A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCCGGCAGGGGC
-CACAGCAGGGGG
 A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

TCF4/MA0830.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTCCGGCAGGGGC-
----NNCAGGTGCG
 A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCCGGCAGGGGC-
----GACAGGTGTN
 A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCCGGCAGGGGC-
----NNCAGGTGNN
 A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCCGGCAGGGGC-----
-ATCCACAGGTGCGAAAA
 A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCCGGCAGGGGC
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

TCF3/MA0522.2/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTCCGGCAGGGGC-
----NNCAGGTGTN
 A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCCGGCAGGGGC
----AACAGGTGT
 A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CTCCGGCAGGGGC--
-----NRRGGGTCTT
 A G T C A C G T A G T C A T G C C A T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T