Information for 10-TTGGATTATDTTB (Motif 17)

A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G
Reverse Opposite:
T A G C C G T A C G T A G C T A C G T A C G A T C G T A C G T A C G A T A G T C A G T C C G T A C T G A
p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.849
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.3 +/- 29.3bp
Average Position of motif in Background53.6 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1/MA0682.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTGGATTATDTTB
-GGGATTAA----
 A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G
A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTGGATTATDTTB
-NGGATTAA----
 A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G
A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTGGATTATDTTB
NGGGATTA-----
 A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTGGATTATDTTB
-GGGATTANN---
 A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTGGATTATDTTB
-RGGATTAR----
 A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G
A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGGATTATDTTB
-CGGATTAN----
 A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G
A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTGGATTATDTTB
GNGGATTAGN---
 A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTGGATTATDTTB
--GGATTAGC---
 A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTGGATTATDTTB
NNGGATTAGN---
 A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTGGATTATDTTB---
TATAATTATAATATTC
 A G C T C G A T A C T G C T A G C G T A A C G T A C G T C G T A A C G T C A G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C