Information for 9-GAAAGACAGKTTT (Motif 12)

A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T
Reverse Opposite:
T C G A C G T A T G C A G T C A G A T C C G A T A C T G A C G T A G T C A C G T A C G T A C G T A G T C
p-value:1e-12
log p-value:-2.920e+01
Information Content per bp:1.814
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif19.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.0 +/- 28.4bp
Average Position of motif in Background41.2 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAAAGACAGKTTT-
--AAAACCGGTTTT
 A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T A C G T
A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAAAGACAGKTTT
AGGTGNCAGACAG----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GAAAGACAGKTTT
AGGTGHCAGACA-----
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGACAGKTTT
AGGGAAGTCATTTCT
 A C G T A C G T A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGACAGKTTT
NTGATTGACAGN---
 A C G T A C G T A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:6
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GAAAGACAGKTTT
VAAACYKGTHWAACMRGTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T
T C G A C T G A C T G A C G T A T A G C G A C T C A T G T C A G G C A T G C A T C G T A C T G A C T G A A G T C G T A C C T A G A T C G G A C T G A C T A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GAAAGACAGKTTT
AATGGAAAAT-------
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GAAAGACAGKTTT
TACTGGAAAAAAAA----
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GAAAGACAGKTTT
NNTGGAAANN-------
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GAAAGACAGKTTT--
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A T A C G C G T A A G T C C G T A C A T G C A G T A C G T A C G T A G C T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T