Information for 15-CAATTAASTG (Motif 21)

A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
Reverse Opposite:
G A T C G T C A A T C G G C A T A G C T C G T A G T C A C G A T C G A T A C T G
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.813
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif90.6
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets50.2 +/- 29.9bp
Average Position of motif in Background54.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSX2/MA0708.1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CAATTAASTG
CCAATTAA---
 A C G T A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:2
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CAATTAASTG
CCAATTAA---
 A C G T A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:3
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CAATTAASTG
CCAATTAG---
 A C G T A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T A C G T

GBX2/MA0890.1/Jaspar

Match Rank:4
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CAATTAASTG
ACCAATTAGC--
 A C G T A C G T A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C A C G T A C G T

RAX/MA0718.1/Jaspar

Match Rank:5
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CAATTAASTG
GCCAATTAAC--
 A C G T A C G T A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C A C G T A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:6
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CAATTAASTG
CAATTAA---
 A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
G T A C C G T A G T C A A C G T A C G T C T G A G C T A A C G T A C G T A C G T

HESX1/MA0894.1/Jaspar

Match Rank:7
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CAATTAASTG
NCCAATTANC--
 A C G T A C G T A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C A C G T A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:8
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CAATTAASTG
CCAATTAC---
 A C G T A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T

LBX2/MA0699.1/Jaspar

Match Rank:9
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CAATTAASTG
GCCAATTAGC--
 A C G T A C G T A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:10
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CAATTAASTG
GCAATTAG---
 A C G T A G T C C G T A C G T A A C G T A C G T C T G A C G T A T A G C A C G T C T A G
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T