Information for 13-AACTTTTATCACC (Motif 19)

C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C
Reverse Opposite:
C T A G A C T G A C G T A C T G C G T A A G C T C G T A C G T A G T C A C T G A C T A G A G C T A C G T
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.1 +/- 26.0bp
Average Position of motif in Background59.3 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0012.1_Cdx1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AACTTTTATCACC---
NAATTTTATTACCTNN
 C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C A C G T A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AACTTTTATCACC---
NAATTTTATTACCNNN
 C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:AACTTTTATCACC-
----ATTAACACCT
 C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AACTTTTATCACC
---YCTTATCWVN
 C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C
A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C

PB0023.1_Gata6_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AACTTTTATCACC---
NNANTCTTATCTNNNNN
 A C G T C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C A C G T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

GATA5/MA0766.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AACTTTTATCACC
---TCTTATCT--
 C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C
A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AACTTTTATCACC
---YSTTATCT--
 C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C
A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AACTTTTATCACC
AGATTCTTATCTGT
 A C G T C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C
C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AACTTTTATCACC
--NTTTTATGAC-
 C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AACTTTTATCACC
--NTTTTATTACN
 C G T A C T G A A G T C A G C T A C G T A C G T A C G T C T G A G A C T A G T C G T C A A G T C A G T C
A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C