Information for 9-TCAGGGCTAAGGCCAG (Motif 15)

A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A G T C A G T C C G A T C G A T C T G A A C T G A G T C A T G C A G T C A C G T A C T G C G T A
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.3 +/- 21.4bp
Average Position of motif in Background59.6 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCAGGGCTAAGGCCAG----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCAGGGCTAAGGCCAG----
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCAGGGCTAAGGCCAG
-TAGGGCAAAGGTCA-
 A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G
A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:TCAGGGCTAAGGCCAG
------CAAAGGTCAG
 A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCAGGGCTAAGGCCAG
GTAGGGCAAAGGTCA-
 A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCAGGGCTAAGGCCAG
-TGGGGCAAAGGTCA-
 A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCAGGGCTAAGGCCAG
AGAGTCCAAAGTCCA-
 A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCAGGGCTAAGGCCAG
-GAGGTCAAAGGTCA-
 A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCAGGGCTAAGGCCAG-
--AAGTTCAAGGTCAGC
 A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G A C G T
A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCAGGGCTAAGGCCAG
CANAGNNCAAAGTCCA-
 A C G T A C G T A G T C C G T A C T A G A T C G C T A G A G T C A G C T C G T A C G T A A C T G A C T G G T A C A G T C C G T A A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T