Information for 3-AAAAWTGACACCAGGG (Motif 6)

C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G
Reverse Opposite:
T A G C A G T C G T A C A C G T A C T G A C T G A C G T A C T G A C G T A G T C C T G A C G T A A G C T A C G T C G A T A C G T
p-value:1e-15
log p-value:-3.670e+01
Information Content per bp:1.765
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.1 +/- 25.3bp
Average Position of motif in Background41.0 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAAAWTGACACCAGGG-
ATAAATGACACCTATCA
 C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PH0166.1_Six6_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAAWTGACACCAGGG-
AATNTTGATACCCTATN
 C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAAAWTGACACCAGGG
GAAAMTGAAACT----
 C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAAAWTGACACCAGGG-
ANANNTGATACCCTATN
 C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAAAWTGACACCAGGG
-----TCACACCT---
 C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAAAWTGACACCAGGG
-----TCACACCT---
 C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G
A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAAAWTGACACCAGGG
---TTTCACACCTN--
 C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G
A C G T A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AAAAWTGACACCAGGG
-----TCACACCT---
 C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G
A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAAAWTGACACCAGGG
---ATTAACACCT---
 C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G
A C G T A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAAAWTGACACCAGGG-
ANANNTGATACCCNATN
 C G T A C G T A C G T A C T G A G C A T A G C T T C A G C G T A T G A C C G T A A G T C A G T C G T C A A C T G T A C G A T C G A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T