Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 843)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47642)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-85	-1.980e+02	0.0000	92.0	10.91%	252.5	0.53%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-55	-1.280e+02	0.0000	88.0	10.44%	508.2	1.08%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-22	-5.204e+01	0.0000	113.0	13.40%	2201.2	4.66%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-21	-4.908e+01	0.0000	95.0	11.27%	1704.9	3.61%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-18	-4.274e+01	0.0000	54.0	6.41%	676.1	1.43%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-17	-4.015e+01	0.0000	82.0	9.73%	1528.3	3.23%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-17	-3.989e+01	0.0000	82.0	9.73%	1535.0	3.25%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-17	-3.980e+01	0.0000	40.0	4.74%	394.8	0.84%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-16	-3.914e+01	0.0000	84.0	9.96%	1620.7	3.43%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-16	-3.868e+01	0.0000	56.0	6.64%	797.8	1.69%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-16	-3.858e+01	0.0000	61.0	7.24%	936.7	1.98%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-16	-3.815e+01	0.0000	112.0	13.29%	2618.3	5.54%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-16	-3.795e+01	0.0000	47.0	5.58%	579.3	1.23%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-16	-3.723e+01	0.0000	66.0	7.83%	1110.8	2.35%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-15	-3.634e+01	0.0000	65.0	7.71%	1101.5	2.33%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-15	-3.525e+01	0.0000	71.0	8.42%	1312.0	2.78%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-15	-3.520e+01	0.0000	123.0	14.59%	3149.3	6.66%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-15	-3.477e+01	0.0000	97.0	11.51%	2202.6	4.66%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-15	-3.461e+01	0.0000	58.0	6.88%	935.1	1.98%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-14	-3.335e+01	0.0000	46.0	5.46%	630.9	1.34%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-14	-3.292e+01	0.0000	131.0	15.54%	3567.0	7.55%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-13	-3.184e+01	0.0000	61.0	7.24%	1090.6	2.31%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-13	-3.105e+01	0.0000	39.0	4.63%	491.6	1.04%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-13	-3.089e+01	0.0000	36.0	4.27%	421.3	0.89%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-12	-2.845e+01	0.0000	96.0	11.39%	2413.7	5.11%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-12	-2.811e+01	0.0000	26.0	3.08%	237.6	0.50%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-11	-2.662e+01	0.0000	133.0	15.78%	3983.0	8.43%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-11	-2.551e+01	0.0000	58.0	6.88%	1170.0	2.48%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-10	-2.331e+01	0.0000	26.0	3.08%	296.8	0.63%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-9	-2.211e+01	0.0000	64.0	7.59%	1492.2	3.16%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e-9	-2.174e+01	0.0000	17.0	2.02%	128.5	0.27%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-9	-2.131e+01	0.0000	100.0	11.86%	2919.1	6.18%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e-9	-2.117e+01	0.0000	36.0	4.27%	599.8	1.27%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-9	-2.116e+01	0.0000	90.0	10.68%	2523.6	5.34%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-8	-2.016e+01	0.0000	70.0	8.30%	1793.4	3.80%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-8	-1.947e+01	0.0000	95.0	11.27%	2819.2	5.97%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-8	-1.943e+01	0.0000	88.0	10.44%	2535.8	5.37%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-8	-1.844e+01	0.0000	34.0	4.03%	605.9	1.28%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-7	-1.839e+01	0.0000	25.0	2.97%	350.9	0.74%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-7	-1.835e+01	0.0000	296.0	35.11%	12430.6	26.31%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-7	-1.820e+01	0.0000	105.0	12.46%	3317.7	7.02%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-7	-1.765e+01	0.0000	62.0	7.35%	1603.3	3.39%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-6	-1.582e+01	0.0000	26.0	3.08%	430.2	0.91%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-6	-1.582e+01	0.0000	55.0	6.52%	1421.5	3.01%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e-6	-1.574e+01	0.0000	125.0	14.83%	4379.0	9.27%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e-6	-1.564e+01	0.0000	74.0	8.78%	2179.9	4.61%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-6	-1.444e+01	0.0000	42.0	4.98%	999.3	2.11%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-6	-1.433e+01	0.0000	73.0	8.66%	2216.0	4.69%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-5	-1.373e+01	0.0000	37.0	4.39%	848.5	1.80%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-5	-1.345e+01	0.0000	61.0	7.24%	1776.5	3.76%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-5	-1.333e+01	0.0000	208.0	24.67%	8594.2	18.19%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e-5	-1.278e+01	0.0000	109.0	12.93%	3904.7	8.26%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-5	-1.257e+01	0.0000	52.0	6.17%	1464.2	3.10%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-5	-1.228e+01	0.0000	183.0	21.71%	7484.4	15.84%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-5	-1.220e+01	0.0000	163.0	19.34%	6514.5	13.79%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-5	-1.167e+01	0.0001	82.0	9.73%	2785.7	5.90%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e-4	-1.098e+01	0.0001	13.0	1.54%	170.3	0.36%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e-4	-1.092e+01	0.0001	13.0	1.54%	171.7	0.36%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-4	-1.086e+01	0.0001	189.0	22.42%	7965.6	16.86%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e-4	-1.075e+01	0.0001	38.0	4.51%	1010.4	2.14%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-4	-9.597e+00	0.0004	86.0	10.20%	3142.5	6.65%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-4	-9.498e+00	0.0004	56.0	6.64%	1817.9	3.85%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e-4	-9.460e+00	0.0005	115.0	13.64%	4514.8	9.55%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-4	-9.397e+00	0.0005	23.0	2.73%	516.7	1.09%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-4	-9.298e+00	0.0005	8.0	0.95%	77.6	0.16%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-3	-9.056e+00	0.0006	42.0	4.98%	1260.0	2.67%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e-3	-8.918e+00	0.0007	16.0	1.90%	299.7	0.63%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-3	-8.764e+00	0.0008	12.0	1.42%	184.6	0.39%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-3	-8.679e+00	0.0009	37.0	4.39%	1078.0	2.28%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-3	-8.548e+00	0.0010	14.0	1.66%	247.2	0.52%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-3	-8.320e+00	0.0012	123.0	14.59%	5037.1	10.66%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e-3	-8.306e+00	0.0012	80.0	9.49%	2990.7	6.33%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-3	-8.197e+00	0.0014	69.0	8.19%	2496.2	5.28%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-3	-8.116e+00	0.0015	101.0	11.98%	3999.6	8.46%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-3	-8.040e+00	0.0016	24.0	2.85%	605.0	1.28%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-3	-7.985e+00	0.0016	7.0	0.83%	71.9	0.15%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-3	-7.868e+00	0.0018	56.0	6.64%	1941.7	4.11%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-3	-7.467e+00	0.0027	17.0	2.02%	376.2	0.80%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-3	-7.369e+00	0.0029	20.0	2.37%	486.9	1.03%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e-2	-6.862e+00	0.0048	14.0	1.66%	294.6	0.62%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-2	-6.848e+00	0.0048	45.0	5.34%	1539.0	3.26%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-2	-6.758e+00	0.0052	90.0	10.68%	3634.9	7.69%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e-2	-6.643e+00	0.0057	138.0	16.37%	6020.6	12.74%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-2	-6.604e+00	0.0059	81.0	9.61%	3221.5	6.82%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e-2	-6.558e+00	0.0061	22.0	2.61%	597.4	1.26%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-2	-6.368e+00	0.0073	150.0	17.79%	6673.1	14.12%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-2	-6.191e+00	0.0086	81.0	9.61%	3271.5	6.92%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-2	-6.161e+00	0.0087	88.0	10.44%	3613.4	7.65%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e-2	-6.159e+00	0.0087	18.0	2.14%	463.6	0.98%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-2	-5.831e+00	0.0119	11.0	1.30%	226.5	0.48%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-2	-5.680e+00	0.0137	49.0	5.81%	1820.7	3.85%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-2	-5.568e+00	0.0151	25.0	2.97%	773.0	1.64%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-2	-5.384e+00	0.0180	81.0	9.61%	3376.3	7.15%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e-2	-5.364e+00	0.0181	47.0	5.58%	1759.6	3.72%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-2	-5.355e+00	0.0181	45.0	5.34%	1668.8	3.53%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-2	-5.228e+00	0.0203	7.0	0.83%	117.0	0.25%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-2	-5.208e+00	0.0205	22.0	2.61%	670.8	1.42%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-2	-5.192e+00	0.0207	55.0	6.52%	2150.7	4.55%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-2	-5.141e+00	0.0215	26.0	3.08%	842.5	1.78%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-2	-5.130e+00	0.0215	45.0	5.34%	1690.4	3.58%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e-2	-5.125e+00	0.0215	49.0	5.81%	1876.6	3.97%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e-2	-5.012e+00	0.0238	11.0	1.30%	253.1	0.54%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-2	-4.891e+00	0.0265	3.0	0.36%	22.1	0.05%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-2	-4.815e+00	0.0284	103.0	12.22%	4556.9	9.64%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-2	-4.633e+00	0.0337	70.0	8.30%	2942.7	6.23%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-1	-4.577e+00	0.0353	89.0	10.56%	3892.5	8.24%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e-1	-4.540e+00	0.0363	5.0	0.59%	74.0	0.16%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-1	-4.514e+00	0.0369	8.0	0.95%	166.0	0.35%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e-1	-4.514e+00	0.0369	14.0	1.66%	386.5	0.82%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-1	-4.495e+00	0.0370	12.0	1.42%	310.3	0.66%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e-1	-4.217e+00	0.0484	53.0	6.29%	2171.4	4.60%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-1	-4.159e+00	0.0508	47.0	5.58%	1890.9	4.00%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e-1	-4.120e+00	0.0523	171.0	20.28%	8217.9	17.39%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-1	-4.046e+00	0.0558	16.0	1.90%	492.6	1.04%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-3.995e+00	0.0583	5.0	0.59%	84.9	0.18%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e-1	-3.974e+00	0.0590	24.0	2.85%	842.2	1.78%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e-1	-3.759e+00	0.0725	49.0	5.81%	2037.8	4.31%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-1	-3.581e+00	0.0859	39.0	4.63%	1577.0	3.34%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-1	-3.540e+00	0.0887	101.0	11.98%	4692.4	9.93%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e-1	-3.476e+00	0.0939	43.0	5.10%	1783.0	3.77%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-1	-3.376e+00	0.1028	9.0	1.07%	245.3	0.52%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e-1	-3.333e+00	0.1065	67.0	7.95%	2995.6	6.34%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-1	-3.304e+00	0.1088	18.0	2.14%	629.9	1.33%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e-1	-3.296e+00	0.1088	6.0	0.71%	136.0	0.29%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-1	-3.271e+00	0.1105	22.0	2.61%	812.1	1.72%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-1	-3.245e+00	0.1126	27.0	3.20%	1046.3	2.21%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e-1	-3.226e+00	0.1138	4.0	0.47%	71.2	0.15%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-1	-3.209e+00	0.1149	43.0	5.10%	1819.3	3.85%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-1	-3.192e+00	0.1159	20.0	2.37%	728.0	1.54%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-3.187e+00	0.1159	9.0	1.07%	254.3	0.54%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-1	-3.144e+00	0.1198	32.0	3.80%	1294.7	2.74%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-1	-3.045e+00	0.1312	93.0	11.03%	4384.9	9.28%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-1	-2.957e+00	0.1422	27.0	3.20%	1078.0	2.28%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e-1	-2.942e+00	0.1432	67.0	7.95%	3066.5	6.49%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-1	-2.939e+00	0.1432	21.0	2.49%	797.8	1.69%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-1	-2.908e+00	0.1461	79.0	9.37%	3689.2	7.81%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-2.861e+00	0.1521	12.0	1.42%	398.5	0.84%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e-1	-2.782e+00	0.1633	32.0	3.80%	1339.9	2.84%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e-1	-2.772e+00	0.1637	30.0	3.56%	1243.8	2.63%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-2.754e+00	0.1655	10.0	1.19%	319.0	0.68%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-1	-2.697e+00	0.1740	29.0	3.44%	1204.9	2.55%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-1	-2.615e+00	0.1875	9.0	1.07%	285.5	0.60%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-1	-2.550e+00	0.1987	19.0	2.25%	742.4	1.57%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-1	-2.475e+00	0.2126	13.0	1.54%	471.6	1.00%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-1	-2.411e+00	0.2253	24.0	2.85%	997.7	2.11%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-1	-2.404e+00	0.2253	30.0	3.56%	1292.1	2.73%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e-1	-2.373e+00	0.2307	8.0	0.95%	257.3	0.54%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-1	-2.373e+00	0.2307	40.0	4.74%	1797.2	3.80%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e-1	-2.349e+00	0.2333	7.0	0.83%	216.3	0.46%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-2.348e+00	0.2333	28.0	3.32%	1201.4	2.54%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-1	-2.332e+00	0.2341	3.0	0.36%	61.3	0.13%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-1	-2.328e+00	0.2341	65.0	7.71%	3089.2	6.54%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-2.282e+00	0.2428	17.0	2.02%	675.2	1.43%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-2.226e+00	0.2551	15.0	1.78%	586.4	1.24%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-2.207e+00	0.2584	24.0	2.85%	1023.9	2.17%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-2.183e+00	0.2612	26.0	3.08%	1125.4	2.38%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e0	-2.183e+00	0.2612	26.0	3.08%	1125.7	2.38%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-2.152e+00	0.2679	17.0	2.02%	689.4	1.46%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-2.082e+00	0.2855	32.0	3.80%	1441.2	3.05%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-2.023e+00	0.3009	8.0	0.95%	281.0	0.59%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-1.998e+00	0.3067	23.0	2.73%	1002.4	2.12%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-1.996e+00	0.3067	5.0	0.59%	151.5	0.32%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.990e+00	0.3067	23.0	2.73%	1003.9	2.12%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.985e+00	0.3067	7.0	0.83%	238.3	0.50%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.928e+00	0.3208	79.0	9.37%	3925.8	8.31%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-1.898e+00	0.3285	13.0	1.54%	524.1	1.11%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-1.864e+00	0.3379	22.0	2.61%	972.0	2.06%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-1.861e+00	0.3379	10.0	1.19%	385.3	0.82%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.813e+00	0.3516	17.0	2.02%	729.9	1.54%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.784e+00	0.3595	7.0	0.83%	252.6	0.53%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.775e+00	0.3610	14.0	1.66%	586.2	1.24%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.767e+00	0.3615	65.0	7.71%	3226.4	6.83%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.738e+00	0.3700	4.0	0.47%	122.1	0.26%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.726e+00	0.3725	15.0	1.78%	641.7	1.36%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.715e+00	0.3745	78.0	9.25%	3934.6	8.33%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.693e+00	0.3805	5.0	0.59%	168.6	0.36%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.687e+00	0.3805	32.0	3.80%	1511.5	3.20%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.677e+00	0.3823	5.0	0.59%	169.6	0.36%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-1.675e+00	0.3823	17.0	2.02%	747.4	1.58%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.655e+00	0.3864	49.0	5.81%	2408.1	5.10%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.642e+00	0.3892	20.0	2.37%	903.4	1.91%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.632e+00	0.3910	30.0	3.56%	1418.8	3.00%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.547e+00	0.4234	69.0	8.19%	3504.0	7.42%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-1.546e+00	0.4234	26.0	3.08%	1227.2	2.60%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.545e+00	0.4234	55.0	6.52%	2755.8	5.83%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-1.534e+00	0.4234	27.0	3.20%	1282.0	2.71%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.526e+00	0.4234	11.0	1.30%	467.4	0.99%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.523e+00	0.4234	5.0	0.59%	180.0	0.38%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.515e+00	0.4235	16.0	1.90%	719.0	1.52%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-1.474e+00	0.4387	79.0	9.37%	4065.6	8.60%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-1.460e+00	0.4426	37.0	4.39%	1821.8	3.86%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.433e+00	0.4523	10.0	1.19%	428.2	0.91%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.431e+00	0.4523	87.0	10.32%	4513.3	9.55%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-1.402e+00	0.4618	24.0	2.85%	1150.3	2.43%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.386e+00	0.4666	151.0	17.91%	8027.1	16.99%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-1.371e+00	0.4714	12.0	1.42%	536.8	1.14%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.358e+00	0.4751	4.0	0.47%	144.1	0.30%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-1.355e+00	0.4751	9.0	1.07%	387.1	0.82%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.329e+00	0.4843	28.0	3.32%	1375.9	2.91%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	-1.246e+00	0.5233	1.0	0.12%	19.6	0.04%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.241e+00	0.5234	30.0	3.56%	1501.8	3.18%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-1.236e+00	0.5235	32.0	3.80%	1609.9	3.41%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.235e+00	0.5235	9.0	1.07%	401.3	0.85%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.205e+00	0.5346	25.0	2.97%	1243.5	2.63%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-1.151e+00	0.5616	2.0	0.24%	64.9	0.14%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-1.133e+00	0.5690	22.0	2.61%	1099.9	2.33%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.125e+00	0.5709	11.0	1.30%	519.5	1.10%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-1.110e+00	0.5769	19.0	2.25%	944.8	2.00%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-1.106e+00	0.5769	24.0	2.85%	1212.9	2.57%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-1.054e+00	0.6038	1.0	0.12%	24.6	0.05%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-9.884e-01	0.6420	4.0	0.47%	173.4	0.37%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-9.844e-01	0.6420	26.0	3.08%	1350.5	2.86%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-9.807e-01	0.6420	26.0	3.08%	1351.5	2.86%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-9.786e-01	0.6420	3.0	0.36%	123.7	0.26%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-9.707e-01	0.6420	20.0	2.37%	1028.0	2.18%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-9.370e-01	0.6603	16.0	1.90%	819.6	1.73%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-9.363e-01	0.6603	14.0	1.66%	712.0	1.51%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-9.313e-01	0.6603	14.0	1.66%	712.2	1.51%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-9.205e-01	0.6620	39.0	4.63%	2080.2	4.40%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-9.078e-01	0.6674	15.0	1.78%	771.2	1.63%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-9.031e-01	0.6676	5.0	0.59%	234.1	0.50%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-8.868e-01	0.6755	4.0	0.47%	183.6	0.39%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-8.777e-01	0.6786	92.0	10.91%	5029.8	10.64%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-8.756e-01	0.6786	32.0	3.80%	1710.6	3.62%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-8.304e-01	0.7051	2.0	0.24%	83.7	0.18%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-8.055e-01	0.7197	22.0	2.61%	1181.0	2.50%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-7.920e-01	0.7263	34.0	4.03%	1849.6	3.91%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e0	-7.877e-01	0.7263	1.0	0.12%	34.3	0.07%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-7.702e-01	0.7358	17.0	2.02%	913.5	1.93%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-7.251e-01	0.7664	5.0	0.59%	257.5	0.54%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-7.234e-01	0.7664	11.0	1.30%	591.1	1.25%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-7.065e-01	0.7741	9.0	1.07%	483.3	1.02%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-6.934e-01	0.7809	60.0	7.12%	3343.5	7.08%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-6.916e-01	0.7809	90.0	10.68%	5025.6	10.64%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e0	-6.761e-01	0.7878	32.0	3.80%	1781.6	3.77%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-6.697e-01	0.7895	29.0	3.44%	1615.7	3.42%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-6.398e-01	0.8100	18.0	2.14%	1006.4	2.13%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-6.329e-01	0.8122	7.0	0.83%	385.2	0.82%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-6.177e-01	0.8212	7.0	0.83%	388.4	0.82%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-6.161e-01	0.8212	115.0	13.64%	6481.7	13.72%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-6.016e-01	0.8276	3.0	0.36%	161.8	0.34%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-5.915e-01	0.8325	26.0	3.08%	1476.2	3.12%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-5.865e-01	0.8332	3.0	0.36%	163.9	0.35%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-5.858e-01	0.8332	8.0	0.95%	452.9	0.96%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-5.811e-01	0.8332	16.0	1.90%	911.7	1.93%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-5.719e-01	0.8352	3.0	0.36%	165.4	0.35%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-5.565e-01	0.8448	21.0	2.49%	1205.4	2.55%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-5.523e-01	0.8449	15.0	1.78%	863.9	1.83%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e0	-5.506e-01	0.8449	3.0	0.36%	168.1	0.36%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-5.399e-01	0.8486	89.0	10.56%	5073.3	10.74%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-5.371e-01	0.8486	46.0	5.46%	2638.3	5.58%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-5.121e-01	0.8656	9.0	1.07%	528.5	1.12%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-5.097e-01	0.8656	10.0	1.19%	587.4	1.24%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-5.082e-01	0.8656	18.0	2.14%	1051.2	2.22%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-5.081e-01	0.8656	6.0	0.71%	353.3	0.75%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-4.993e-01	0.8656	7.0	0.83%	414.1	0.88%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-4.989e-01	0.8656	30.0	3.56%	1745.1	3.69%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-4.914e-01	0.8656	1.0	0.12%	53.5	0.11%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-4.821e-01	0.8678	2.0	0.24%	117.2	0.25%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-4.694e-01	0.8722	1.0	0.12%	55.8	0.12%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-4.694e-01	0.8722	1.0	0.12%	56.0	0.12%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-4.624e-01	0.8749	4.0	0.47%	243.2	0.51%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-4.501e-01	0.8824	3.0	0.36%	184.3	0.39%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-4.463e-01	0.8825	44.0	5.22%	2578.1	5.46%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-4.462e-01	0.8825	2.0	0.24%	122.8	0.26%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-4.444e-01	0.8825	3.0	0.36%	185.4	0.39%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-4.437e-01	0.8825	11.0	1.30%	666.5	1.41%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e0	-4.394e-01	0.8825	2.0	0.24%	123.7	0.26%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-4.377e-01	0.8825	56.0	6.64%	3272.9	6.93%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-4.285e-01	0.8825	16.0	1.90%	966.1	2.04%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-4.195e-01	0.8825	2.0	0.24%	127.0	0.27%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-4.195e-01	0.8825	2.0	0.24%	127.0	0.27%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-4.195e-01	0.8825	1.0	0.12%	60.2	0.13%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-4.068e-01	0.8844	2.0	0.24%	128.6	0.27%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-4.035e-01	0.8844	13.0	1.54%	799.9	1.69%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-3.949e-01	0.8886	23.0	2.73%	1392.7	2.95%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-3.711e-01	0.9066	2.0	0.24%	134.6	0.28%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-3.671e-01	0.9070	29.0	3.44%	1759.8	3.72%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-3.595e-01	0.9107	5.0	0.59%	329.9	0.70%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-3.465e-01	0.9193	14.0	1.66%	883.4	1.87%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-3.410e-01	0.9211	25.0	2.97%	1541.0	3.26%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-3.326e-01	0.9255	3.0	0.36%	208.4	0.44%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-3.249e-01	0.9294	25.0	2.97%	1550.4	3.28%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-3.237e-01	0.9294	1.0	0.12%	72.9	0.15%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-3.236e-01	0.9294	2.0	0.24%	143.8	0.30%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-3.230e-01	0.9294	6.0	0.71%	403.0	0.85%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-3.203e-01	0.9294	3.0	0.36%	211.6	0.45%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-3.115e-01	0.9294	17.0	2.02%	1081.5	2.29%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-3.103e-01	0.9294	1.0	0.12%	74.5	0.16%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-3.077e-01	0.9294	4.0	0.47%	280.3	0.59%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-2.907e-01	0.9353	57.0	6.76%	3454.5	7.31%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-2.884e-01	0.9353	90.0	10.68%	5369.0	11.36%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-2.859e-01	0.9353	3.0	0.36%	221.0	0.47%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-2.805e-01	0.9353	11.0	1.30%	732.8	1.55%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-2.778e-01	0.9353	7.0	0.83%	483.8	1.02%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-2.754e-01	0.9353	7.0	0.83%	484.3	1.02%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-2.740e-01	0.9353	1.0	0.12%	80.0	0.17%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-2.734e-01	0.9353	9.0	1.07%	611.5	1.29%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-2.706e-01	0.9353	17.0	2.02%	1105.2	2.34%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.486e-01	0.9463	14.0	1.66%	935.6	1.98%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-2.322e-01	0.9587	24.0	2.85%	1557.8	3.30%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-2.278e-01	0.9597	9.0	1.07%	634.2	1.34%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-2.238e-01	0.9604	24.0	2.85%	1564.1	3.31%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-2.077e-01	0.9728	4.0	0.47%	315.9	0.67%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-2.016e-01	0.9756	6.0	0.71%	453.9	0.96%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-2.000e-01	0.9756	163.0	19.34%	9708.1	20.55%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.930e-01	0.9776	33.0	3.91%	2138.9	4.53%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.914e-01	0.9776	18.0	2.14%	1224.8	2.59%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-1.879e-01	0.9776	3.0	0.36%	253.1	0.54%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.756e-01	0.9851	39.0	4.63%	2520.2	5.33%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.694e-01	0.9880	2.0	0.24%	186.7	0.40%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.675e-01	0.9880	17.0	2.02%	1183.3	2.50%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-1.644e-01	0.9880	6.0	0.71%	474.1	1.00%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e0	-1.563e-01	0.9915	9.0	1.07%	680.1	1.44%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-1.562e-01	0.9915	7.0	0.83%	547.1	1.16%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.444e-01	0.9971	106.0	12.57%	6533.7	13.83%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-1.296e-01	1.0000	59.0	7.00%	3792.7	8.03%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-1.178e-01	1.0000	1.0	0.12%	123.4	0.26%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.153e-01	1.0000	4.0	0.47%	366.2	0.78%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.146e-01	1.0000	7.0	0.83%	580.7	1.23%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-1.140e-01	1.0000	4.0	0.47%	367.4	0.78%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-1.115e-01	1.0000	6.0	0.71%	513.3	1.09%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.078e-01	1.0000	3.0	0.36%	296.5	0.63%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.040e-01	1.0000	66.0	7.83%	4267.3	9.03%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.002e-01	1.0000	2.0	0.24%	221.4	0.47%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-7.161e-02	1.0000	5.0	0.59%	482.8	1.02%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-7.127e-02	1.0000	68.0	8.07%	4482.1	9.49%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-7.039e-02	1.0000	26.0	3.08%	1895.0	4.01%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-6.859e-02	1.0000	54.0	6.41%	3642.0	7.71%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-5.950e-02	1.0000	9.0	1.07%	790.9	1.67%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-5.854e-02	1.0000	10.0	1.19%	862.1	1.82%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-5.558e-02	1.0000	19.0	2.25%	1477.7	3.13%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-5.215e-02	1.0000	66.0	7.83%	4435.8	9.39%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-5.000e-02	1.0000	7.0	0.83%	664.5	1.41%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-4.439e-02	1.0000	74.0	8.78%	4959.9	10.50%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-3.778e-02	1.0000	5.0	0.59%	538.4	1.14%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-3.118e-02	1.0000	31.0	3.68%	2349.0	4.97%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-3.005e-02	1.0000	11.0	1.30%	1007.5	2.13%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-2.883e-02	1.0000	84.0	9.96%	5669.0	12.00%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-2.511e-02	1.0000	2.0	0.24%	312.6	0.66%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-2.286e-02	1.0000	50.0	5.93%	3616.5	7.65%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-2.028e-02	1.0000	6.0	0.71%	671.8	1.42%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.952e-02	1.0000	4.0	0.47%	510.7	1.08%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-1.846e-02	1.0000	14.0	1.66%	1276.4	2.70%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-1.522e-02	1.0000	74.0	8.78%	5195.3	10.99%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-4.220e-03	1.0000	4.0	0.47%	625.8	1.32%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-4.172e-03	1.0000	147.0	17.44%	9927.4	21.01%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-2.823e-03	1.0000	61.0	7.24%	4685.1	9.92%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-2.174e-03	1.0000	29.0	3.44%	2591.4	5.48%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	34.0	0.07%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	18.5	0.04%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	0.000e+00	1.0000	0.0	0.00%	117.7	0.25%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	16.2	0.03%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	2.9	0.01%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	61.9	0.13%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	27.3	0.06%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	7.9	0.02%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	18.7	0.04%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	0.000e+00	1.0000	0.0	0.00%	28.9	0.06%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	1.1	0.00%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	83.2	0.18%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	11.4	0.02%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	0.000e+00	1.0000	0.0	0.00%	39.3	0.08%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	7.0	0.01%