Information for 2-AAACCACATG (Motif 2)

G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G
Reverse Opposite:
T A G C G C T A A G C T T A C G C A G T C T A G A T C G A G C T C G A T C G A T
p-value:1e-30
log p-value:-6.976e+01
Information Content per bp:1.682
Number of Target Sequences with motif108.0
Percentage of Target Sequences with motif12.81%
Number of Background Sequences with motif1628.5
Percentage of Background Sequences with motif3.45%
Average Position of motif in Targets47.5 +/- 26.0bp
Average Position of motif in Background49.7 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:AAACCACATG
AAACCACANN
 G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AAACCACATG-
NWAACCACADNN
 A C G T G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AAACCACATG
NAAACCACAG-
 A C G T G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:AAACCACATG
AAACCACAGC
 G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:AAACCACATG-
AAACCACAGAN
 G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AAACCACATG
AAACCGCAA-
 G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AAACCACATG
AAACCGCAAA
 G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

Myc/MA0147.2/Jaspar

Match Rank:8
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AAACCACATG-
-AAGCACATGG
 G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G A C G T
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G

Mycn/MA0104.3/Jaspar

Match Rank:9
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AAACCACATG
--GCCACGTG
 G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AAACCACATG
TCCAATCCACA--
 A C G T A C G T A C G T G C T A G C T A T C G A A T G C G A T C G T C A A T G C T C G A C G A T A T C G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T