Information for 9-CTATTTWTAG (Motif 6)

A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G
Reverse Opposite:
G A T C G C A T C T G A C G T A C G T A C G T A G C T A C G A T C T G A T C A G
p-value:1e-17
log p-value:-4.137e+01
Information Content per bp:1.646
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.83%
Number of Background Sequences with motif365.2
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets49.3 +/- 24.5bp
Average Position of motif in Background50.8 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTWTAG-
KCTATTTTTRGH
 A C G T A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTWTAG-
TCTATTTTTAGA
 A C G T A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-CTATTTWTAG-
GCTATTTTTAGC
 A C G T A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTWTAG-
TCTATTTATAGN
 A C G T A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--CTATTTWTAG---
TTCTATTTTTAGNNN
 A C G T A C G T A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CTATTTWTAG-
GCTATTTATAGC
 A C G T A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CTATTTWTAG-
GCTATTTTTGGM
 A C G T A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:CTATTTWTAG
CTATTTTTGG
 A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----CTATTTWTAG
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----CTATTTWTAG
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T G C T A C G A T A C G T A C G T G C A T G A C T C G T A C T A G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C