Information for 22-AKHACTTGCG (Motif 26)

C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G
Reverse Opposite:
G T A C A T C G G A T C C G T A C T G A T A C G C G A T C A G T T G A C G A C T
p-value:1e-3
log p-value:-9.185e+00
Information Content per bp:1.523
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 32.7bp
Average Position of motif in Background68.4 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AKHACTTGCG
AAGCACTTAA-
 A C G T C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

POL005.1_DPE/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AKHACTTGCG
NACATCTTN--
 A C G T C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G
C T G A C T G A A T G C C T G A C G A T T A G C G A C T C A G T A G T C A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AKHACTTGCG-
CNTTAAGTACTTAANG
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AKHACTTGCG--
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

ETV6/MA0645.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AKHACTTGCG--
--CACTTCCGCT
 C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G A C G T A C G T
A C G T A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AKHACTTGCG----
CAATCACTGGCAGAAT
 A C G T A C G T C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AKHACTTGCG--
-NNACTTGCCTT
 C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G A C G T A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------AKHACTTGCG-
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

ETS(ETS)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AKHACTTGCG---
---ACTTCCGGTT
 C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AKHACTTGCG
MRSCACTYAA-
 A C G T C T G A A C T G G T C A G C T A A T G C G A C T G C A T C T A G T A G C C A T G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T