Information for 17-RGARGMAGGTGCW (Motif 16)

C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A
Reverse Opposite:
C G A T A C T G A G T C C G T A A T G C A G T C A C G T A C T G A G T C A G C T A G C T A G T C A G T C
p-value:1e-9
log p-value:-2.265e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.3 +/- 20.9bp
Average Position of motif in Background47.0 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:RGARGMAGGTGCW-
--SDGCAGGTGCNS
 C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:RGARGMAGGTGCW
---AACAGGTGT-
 C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:RGARGMAGGTGCW
---GACAGGTGTN
 C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:RGARGMAGGTGCW
---NNCAGGTGCG
 C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A
A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:RGARGMAGGTGCW
---NNCAGGTGTN
 C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A
A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:RGARGMAGGTGCW
---NNCAGGTGNN
 C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:RGARGMAGGTGCW
NGNGACAGCTGCN
 C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:RGARGMAGGTGCW----
ATCCACAGGTGCGAAAA
 C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-RGARGMAGGTGCW
AGGAAACAGCTG--
 A C G T C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:RGARGMAGGTGCW
---AGCAGCTGCT
 C T A G A C T G C T G A C T G A A C T G G T A C C G T A A C T G A T C G A C G T A C T G A G T C C G T A
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T