Information for 8-TGTCARTCATTAGCCA (Motif 10)

A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
Reverse Opposite:
C G A T A C T G A C T G A G T C C G A T C T G A G T C A A C G T A C T G C G T A G A C T A C G T T A C G G T C A G T A C G T C A
p-value:1e-11
log p-value:-2.727e+01
Information Content per bp:1.755
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.1 +/- 22.0bp
Average Position of motif in Background37.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF1B/MA0153.2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGTCARTCATTAGCCA
-GTTAATNATTAAC--
 A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
A C G T C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTCARTCATTAGCCA
NCTGTCAATCAN------
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGTCARTCATTAGCCA
--TTAATNATTAAC--
 A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
A C G T A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTCARTCATTAGCCA
SCTGTCAVTCAV------
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTCARTCATTAGCCA
NGTTAATNATTAACN-
 A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGTCARTCATTAGCCA
GSCTGTCACTCA-------
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGTCARTCATTAGCCA
TGTGACTCATT-----
 A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGTCARTCATTAGCCA
GGTTAAACATTAA---
 A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTCARTCATTAGCCA
--TGAGTCATTTC---
 A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
A C G T A C G T C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGTCARTCATTAGCCA
----RGCCATYAATCA
 A C G T A C T G A C G T A G T C C G T A C T G A C G A T A G T C G T C A A C G T A G C T C G T A C T A G G T A C A G T C C G T A
A C G T A C G T A C G T A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A