Information for 13-CCACTAGATGTGA (Motif 9)

A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A
Reverse Opposite:
C A G T A T G C G C T A A T G C G C T A A C G T G T A C G A C T T C G A A T C G G C A T C T A G C T A G
p-value:1e-15
log p-value:-3.631e+01
Information Content per bp:1.682
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.9 +/- 31.1bp
Average Position of motif in Background18.4 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0114.1_Nkx2-5/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCACTAGATGTGA
TAAGCCACTTGAATTT-
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCACTAGATGTGA
-----AGGTGTGA
 A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCACTAGATGTGA--
----TAGGTGTGAAG
 A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCACTAGATGTGA
ACCACTTGAA----
 A C G T A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCACTAGATGTGA
-----AGGTGTGA
 A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A
A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCACTAGATGTGA
TAAGCCACTTGAAATT-
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T A C G T

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCACTAGATGTGA
-----AGGTGTGA
 A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCACTAGATGTGA
CCACTTGAA----
 A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCACTAGATGTGA-
TCAGNGAGCGTGAC
 A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCACTAGATGTGA
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A T A G C A G C T C G T A A C T G T G C A C G A T A T C G C G A T A T C G G T C A
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T