Information for 21-GAAGCTTCAC (Motif 27)

A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A C T G A A C T G A G T C A G C T A C G T A G T C
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.855
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.9 +/- 25.2bp
Average Position of motif in Background66.0 +/- 10.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GAAGCTTCAC
CAAGCTT---
 A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GAAGCTTCAC
---GCTTCC-
 A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------GAAGCTTCAC---
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GAAGCTTCAC
TTCTAGAACGTTC--
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GAAGCTTCAC
ADGGYAGYAGCATCT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

HSF1/MA0486.2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GAAGCTTCAC
TTCTAGAACGTTC--
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GAAGCTTCAC
TTCTAGAACGTTC--
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GAAGCTTCAC
TTCTAGAABNTTCTA
 A C G T A C G T A C G T A C G T A C G T A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCTTCAC
CGGAGC-----
 A C G T A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAAGCTTCAC
-CAGCC----
 A C T G T C G A C T G A A C T G A G T C A G C T A C G T A G T C G T C A A G T C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T