Information for 19-RCGTGGTAAT (Motif 23)

T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T
Reverse Opposite:
C T G A A C G T C G A T C G T A A T G C A G T C C T G A T A G C T C A G A G C T
p-value:1e-10
log p-value:-2.455e+01
Information Content per bp:1.754
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.1 +/- 30.6bp
Average Position of motif in Background60.6 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAX::MYC/MA0059.1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----RCGTGGTAAT
GACCACGTGGT---
 A C G T A C G T A C G T A C G T T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T
C T A G C T G A T A C G G T A C C G T A A G T C C T A G A G C T A C T G A C T G G A C T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:RCGTGGTAAT-
-CSTGGGAAAD
 T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Mycn/MA0104.3/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-RCGTGGTAAT
CACGTGGC---
 A C G T T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RCGTGGTAAT
CACGTGGN---
 A C G T T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T
G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--RCGTGGTAAT
GGACGTGC----
 A C G T A C G T T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---RCGTGGTAAT
NNCACGTGGT---
 A C G T A C G T A C G T T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RCGTGGTAAT
AGGTGTTAAT
 T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RCGTGGTAAT
CACGTGNT---
 A C G T T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T
G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:9
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------RCGTGGTAAT
CCNNANCACGTGGTCN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A A C G T

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---RCGTGGTAAT
NGCACGTGNT---
 A C G T A C G T A C G T T C G A A G T C A T C G A G C T A C T G A T C G G A C T C G T A C G T A A G C T
C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T A C G T A C G T