Information for 16-GCAGGCTCTGCCT (Motif 19)

C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T
Reverse Opposite:
C G T A A C T G A T C G A G T C T C G A A T C G C G T A A T C G A G T C A G T C A G C T A C T G A G T C
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.798
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets40.8 +/- 25.7bp
Average Position of motif in Background45.2 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCAGGCTCTGCCT-
----GCTCGGSCTC
 C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCAGGCTCTGCCT-
GGGGCCGAGGCCTG
 C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

MAFG/MA0659.1/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGGCTCTGCCT---
AATNTGCTGACTCAGCANTTT
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T A C G T A C G T A C G T
C G T A C G T A G C A T C G T A G A C T T A C G G T A C G A C T C A T G G T C A T A G C C G A T G T A C C T G A C A T G A T G C C T G A G C T A C G A T G C A T G C A T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCAGGCTCTGCCT
GCTGASTCAGCA-
 C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCAGGCTCTGCCT----
WNTGCTGASTCAGCANWTTY
 A C G T A C G T A C G T C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGCTCTGCCT-
AGATGCTRCTRCCHT
 A C G T C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCAGGCTCTGCCT-------
YCAGGCWCAGTACCAGGCTC
 C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGCTCTGCCT
TGCGCAGGCGC-----
 A C G T A C G T A C G T C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCAGGCTCTGCCT
BCAGACWA-----
 C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGCTCTGCCT
CACAGN--------
 A C G T C T A G A G T C C T G A A C T G T A C G A T G C G A C T A T G C A G C T C T A G A T G C G T A C C G A T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T