Information for 16-CATTTAATGA (Motif 18)

T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A
Reverse Opposite:
A C G T G T A C C G T A A C G T C A G T C G T A C G T A C T G A C A G T A T C G
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.772
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets58.4 +/- 24.1bp
Average Position of motif in Background38.5 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:CATTTAATGA
--TTTAAT--
 T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CATTTAATGA-----
NNAATTAATGACCNNN
 A C G T T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A A C G T A C G T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CATTTAATGA
--GKTAATGR
 T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A
A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

NKX6-1/MA0674.1/Jaspar

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CATTTAATGA-
---TTAATTAN
 T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A A C G T
A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

NKX6-2/MA0675.1/Jaspar

Match Rank:5
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CATTTAATGA-
---TTAATTAN
 T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A A C G T
A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

Hoxd9/MA0913.1/Jaspar

Match Rank:6
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CATTTAATGA-
-TTTTTATTGC
 T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A A C G T
A C G T C G A T G C A T C A G T C G A T C G A T C G T A G A C T A C G T C T A G A G T C

GSX2/MA0893.1/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CATTTAATGA--
--NTTAATTAGN
 T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A A C G T A C G T
A C G T A C G T C A G T A G C T C G A T C G T A C G T A G C A T C A G T C T G A T A C G C A G T

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CATTTAATGA-
-NTTTTACGAC
 T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A A C G T
A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

PH0056.1_Hoxa9/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CATTTAATGA----
ANTAATTTTATGGCCGN
 A C G T A C G T A C G T T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A A C G T A C G T A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CATTTAATGA--
--TTTAATTGCN
 T A G C G T C A A G C T A C G T C G A T G T C A G T C A A C G T C A T G T G C A A C G T A C G T
A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C