Information for 9-AAAAATACAAAAC (Motif 9)

C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C
Reverse Opposite:
A C T G A C G T A C G T A C G T A C G T A C T G A G C T C G T A A C G T A C G T A C G T A C G T C G A T
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.4 +/- 34.2bp
Average Position of motif in Background14.3 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAAAATACAAAAC
ATGCTAAAAATAGAA---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAAATACAAAAC
GAAAAAATTGCAAGG-
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAAATACAAAAC--
CATACAATACGAAATAA
 A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAAAATACAAAAC
CAAAAGTAAACAAAG-
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAAAATACAAAAC---
--AAATAAGAAAAAAC
 C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C A C G T A C G T A C G T
A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0123.1_Foxl1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAAATACAAAAC-
ATATCAAAACAAAACA
 A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAAATACAAAAC--
GTTAAAAAAAAAAATTA
 A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAAATACAAAAC
AACAAACAACAAGAG
 A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAAAATACAAAAC
AAACAAACATTC-
 C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAAAATACAAAAC
DCYAAAAATAGM----
 A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G A T C T G A A G T C C G T A C G T A C G T A C G T A G T A C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T