Information for 7-CGGGCTCTCCTCT (Motif 5)

A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T
Reverse Opposite:
C T G A A C T G C T G A C A T G A C T G C G T A T A C G G T C A A C T G G T A C A G T C A G T C C T A G
p-value:1e-11
log p-value:-2.711e+01
Information Content per bp:1.804
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.4 +/- 29.1bp
Average Position of motif in Background46.7 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGGGCTCTCCTCT
-AASCACTCAA--
 A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGGGCTCTCCTCT
--NGCTN------
 A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGGGCTCTCCTCT
-AGCCACTCAAG-
 A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGGGCTCTCCTCT
CTGTCTGTCACCT
 A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CGGGCTCTCCTCT
GGGGATTTCC---
 A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CGGGCTCTCCTCT
GCTCGGSCTC------
 A C G T A C G T A C G T A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGGGCTCTCCTCT-
NNGGCCACGCCTTTN
 A C G T A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

SP2/MA0516.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CGGGCTCTCCTCT----
--GCCCCGCCCCCTCCC
 A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGGGCTCTCCTCT
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CGGGCTCTCCTCT
-----TCTTATCT
 A G T C T C A G C T A G A C T G A G T C A C G T A G T C C G A T A G T C G A T C A G C T A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T