Information for 7-TGGGTTYTGA (Motif 4)

C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A
Reverse Opposite:
G A C T T A G C C G T A T C A G T G C A C T G A T G A C G T A C G T A C G C T A
p-value:1e-14
log p-value:-3.324e+01
Information Content per bp:1.466
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.50%
Number of Background Sequences with motif251.8
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets55.9 +/- 26.3bp
Average Position of motif in Background47.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGGTTYTGA------
TGGACTTTGNNCTNTG
 C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGGTTYTGA----
ATTGGACTTTGACCCC
 A C G T A C G T C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGGTTYTGA
TGGTTTCAGT
 C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGGTTYTGA-----
TGGACTTTGNNCTCN
 C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGGGTTYTGA
CGTGGGTGGTCC
 A C G T A C G T C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGGGTTYTGA
-NGGATTAN-
 C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGGTTYTGA-----
AGNGTTCTAATGANN
 C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGGGTTYTGA----
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGGGTTYTGA----
--GGTGYTGACAGS
 C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TGGGTTYTGA
NGGGATTA--
 C G A T C A T G C A T G A C T G G A C T A C G T A G T C G C A T A T C G C T G A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T