Information for 15-CCSCGCTGGCCTC (Motif 11)

A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C
Reverse Opposite:
A C T G G C T A A C T G A C T G A T G C A G T C C G T A A C T G A G T C A C T G A T G C C T A G A C T G
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.832
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif28.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets67.2 +/- 23.0bp
Average Position of motif in Background56.2 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCSCGCTGGCCTC
---NGCTN-----
 A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCSCGCTGGCCTC
CCCCCTTGGGCCCC
 A C G T A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCSCGCTGGCCTC-
DCHCAGCAGGRGGCC
 A C G T A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCSCGCTGGCCTC
---GGTTGGCAT-
 A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCSCGCTGGCCTC
NAHCAGCTGD----
 A C G T A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCSCGCTGGCCTC
NAACAGCTGG----
 A C G T A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CCSCGCTGGCCTC
-----TTGGCA--
 A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCSCGCTGGCCTC
-CCTGCTGAGH--
 A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCSCGCTGGCCTC
--NNACTTGCCTT
 A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCSCGCTGGCCTC
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A G T C A G T C A T C G G T A C A C T G A G T C A C G T C T A G A T C G G T A C G T A C C G A T A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T