Information for 8-TGTTAGTTAA (Motif 10)

A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A
Reverse Opposite:
A G C T C G A T C G T A C G T A A T G C A C G T C G T A G T C A T A G C G T C A
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.861
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.4 +/- 27.8bp
Average Position of motif in Background47.8 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TGTTAGTTAA------
NTTTTAGTTAACNNAGN
 A C G T A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:TGTTAGTTAA-
-ACTAGTTAAC
 A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TGTTAGTTAA------
NNNTTAGTTAACTNANN
 A C G T A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAGTTAA-----
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0153.1_Prop1/Jaspar

Match Rank:5
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TGTTAGTTAA----
GNNTNTTAATTAATNCN
 A C G T A C G T A C G T A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G

PH0136.1_Phox2b/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAGTTAA-----
CNNNTTAATTAATTNNN
 A C G T A C G T A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

PH0069.1_Hoxc4/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGTTAGTTAA----
NNTNNTTAATTAATNCG
 A C G T A C G T A C G T A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T
C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G

PH0128.1_Otp/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAGTTAA-----
CNNATTAATTAATTNNN
 A C G T A C G T A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G

PH0101.1_Lmx1b/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TGTTAGTTAA----
AGTTTTTAATTAATTTG
 A C G T A C G T A C G T A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0173.1_Uncx/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAGTTAA-----
CNCNTTAATTAATTANN
 A C G T A C G T A C G T A T C G A C G T A C G T C G T A A T C G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G