Information for 10-GAGTGGTGAC (Motif 9)

T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C
Reverse Opposite:
A T C G A G C T A G T C C T G A A T G C G T A C G T C A A G T C A C G T A T G C
p-value:1e-8
log p-value:-1.842e+01
Information Content per bp:1.792
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif73.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets33.1 +/- 25.2bp
Average Position of motif in Background52.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GAGTGGTGAC
TTRAGTGSYK--
 A C G T A C G T T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGGTGAC
TTGAGTGSTT--
 A C G T A C G T T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGGTGAC
CTTGAGTGGCT--
 A C G T A C G T A C G T T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGGTGAC
CTYRAGTGSY---
 A C G T A C G T A C G T T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GAGTGGTGAC
BTBRAGTGSN---
 A C G T A C G T A C G T T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGTGGTGAC---
-GGTGYTGACAGS
 T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C A C G T A C G T A C G T
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGGTGAC
TTAAGTGCTT--
 A C G T A C G T T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGTGGTGAC-
AAAATGCTGACT
 A C G T T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGGTGAC
NTCAAGTGGN---
 A C G T A C G T A C G T T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGGTGAC
NTCAAGTGG----
 A C G T A C G T A C G T T A C G C G T A C T A G A C G T A C T G A T C G A G C T T C A G C T G A T A G C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T