Information for 10-TNCAAATGAAATA (Motif 5)

C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G C T A C G T A G T C G T C A A C G T A C G T A C G T A C T G A C G T C G T A
p-value:1e-13
log p-value:-3.096e+01
Information Content per bp:1.829
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 18.5bp
Average Position of motif in Background19.4 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TNCAAATGAAATA
WATGCAAATGAG---
 A C G T A C G T C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TNCAAATGAAATA
ATATGCAAATNNN---
 A C G T A C G T A C G T C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TNCAAATGAAATA
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TNCAAATGAAATA
--NACAGGAAAT-
 C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TNCAAATGAAATA
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TNCAAATGAAATA
TTGTATGCAAATTAGA--
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TNCAAATGAAATA
-GAAAMTGAAACT
 C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

Lhx3/MA0135.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TNCAAATGAAATA---
---AAATTAATTAATC
 C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TNCAAATGAAATA
BAGTCATANTGAAAG-
 A C G T A C G T A C G T C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TNCAAATGAAATA---
-TTGAATGAAATTCGA
 C G A T C G T A G T A C C G T A C G T A G T C A A C G T A C T G C G T A C T G A G T C A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A