Information for 7-GRAAAAAGGGNAGAAG (Motif 4)

C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
Reverse Opposite:
A G T C A G C T A G C T A G T C A C G T T A G C A T G C A G T C G A T C A C G T A C G T A G C T A G C T A C G T A G C T G A T C
p-value:1e-16
log p-value:-3.697e+01
Information Content per bp:1.697
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.1 +/- 17.7bp
Average Position of motif in Background78.8 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GRAAAAAGGGNAGAAG
GGGRAARRGRMCAGMTG
 A C G T C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GRAAAAAGGGNAGAAG
TACTGGAAAAAAAA-------
 A C G T A C G T A C G T A C G T A C G T C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GRAAAAAGGGNAGAAG
GTAGGGCAAAGGTCA----
 A C G T A C G T A C G T C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GRAAAAAGGGNAGAAG
ANGNAAAGGTCA----
 C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GRAAAAAGGGNAGAAG
TAGGGCAAAGGTCA----
 A C G T A C G T C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GRAAAAAGGGNAGAAG
TGGGGCAAAGGTCA----
 A C G T A C G T C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GRAAAAAGGGNAGAAG
-AAAAAGAGGAAGTA-
 C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GRAAAAAGGGNAGAAG
GGAACAAAGR-------
 A C G T C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rarb/MA0857.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GRAAAAAGGGNAGAAG
AAAGGTCAAAAGGTCA----
 A C G T A C G T A C G T A C G T C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GRAAAAAGGGNAGAAG
AAAACAAAGG-------
 A C G T C T A G T C G A T G C A C T G A T C G A G T C A G T C A C A T G C T A G A T C G A C T G C G T A C T A G T C G A C T G A T C A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T