Information for 1-CTGTCCAWGGTGCTGA (Motif 1)

G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A
Reverse Opposite:
A G C T A T G C G C T A C T A G A G T C C G T A A G T C G A T C C G T A G C A T C T A G C T A G G T C A A T G C G C T A C T A G
p-value:1e-433
log p-value:-9.988e+02
Information Content per bp:1.725
Number of Target Sequences with motif205.0
Percentage of Target Sequences with motif24.70%
Number of Background Sequences with motif39.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.6 +/- 13.2bp
Average Position of motif in Background47.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.95
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCCAWGGTGCTGA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.94
Offset:-4
Orientation:forward strand
Alignment:----CTGTCCAWGGTGCTGA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGTCCAWGGTGCTGA
CTGTTCCTGG------
 G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGTCCAWGGTGCTGA
CTGACCTTTG------
 G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCAWGGTGCTGA
GCTGTCAA---------
 A C G T G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCAWGGTGCTGA
BNTGDCCTTG-------
 A C G T G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCAWGGTGCTGA
CCTGTCAA---------
 A C G T G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTGTCCAWGGTGCTGA
GCTGTG-----------
 A C G T G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.49
Offset:10
Orientation:forward strand
Alignment:CTGTCCAWGGTGCTGA----
----------TGCTGACTCA
 G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGTCCAWGGTGCTGA
NTGTCAN---------
 G A T C C G A T T A C G C A G T A G T C A G T C C G T A G C A T C T A G A C T G A C G T T C A G G A T C C G A T T A C G T C G A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T