Information for 12-GTTAGTAGTGTGC (Motif 8)

A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A G T A C G T C A A T G C A G C T C G T A A G T C C G A T G T C A G T C A A G T C
p-value:1e-10
log p-value:-2.439e+01
Information Content per bp:1.799
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.2 +/- 29.9bp
Average Position of motif in Background60.7 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTAGTAGTGTGC----
-NNNNTTGTGTGCTTNN
 A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTTAGTAGTGTGC
TTAAGTGCTT---
 A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GTTAGTAGTGTGC---
----GTGGCGTGACNG
 A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTTAGTAGTGTGC
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTTAGTAGTGTGC
NNHTGTGGTTWN-
 A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GTTAGTAGTGTGC-
----ATGGGGTGAT
 A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GTTAGTAGTGTGC
----GTTTGTT--
 A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GTTAGTAGTGTGC
-NNTGTGGTTT--
 A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GTTAGTAGTGTGC-
----GTGGGGTGAT
 A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

RREB1/MA0073.1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GTTAGTAGTGTGC--
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T C T G A A T C G A C G T A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G