Information for 11-CGCCCTGGCCCAG (Motif 6)

A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G
Reverse Opposite:
A T G C A C G T A C T G A T C G C A T G A G T C G T A C C G T A C A T G A C T G A C T G A T G C T A C G
p-value:1e-8
log p-value:-1.967e+01
Information Content per bp:1.778
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif41.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets57.2 +/- 20.0bp
Average Position of motif in Background50.8 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCCCTGGCCCAG--
GAGCCCTTGTCCCTAA
 A C G T A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CGCCCTGGCCCAG---
------TGCCCAGNHW
 A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCCCTGGCCCAG
KGCCCTTCCCCA-
 A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGCCCTGGCCCAG
-GCGCATGCGCAG
 A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCCCTGGCCCAG
GGCCCCGCCCCC-
 A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGCCCTGGCCCAG
----TTGGCA---
 A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGCCCTGGCCCAG
GGGGCCGAGGCCTG-
 A C G T A C G T A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGCCCTGGCCCAG
---NTTGGCANN-
 A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CGCCCTGGCCCAG
-----AGGCCTAG
 A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGCCCTGGCCCAG----
-NNCNTGACCCCGCTCT
 A G T C A T C G A G T C G T A C G A T C A C G T A C T G A C T G G A T C A T G C G T A C T C G A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T