Information for 10-CAGAGGGCCTHTC (Motif 5)

G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C T G C T A G A T G C A G T C A G T C A G C T A G T C C G A T A C T G
p-value:1e-10
log p-value:-2.314e+01
Information Content per bp:1.843
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets50.0 +/- 20.4bp
Average Position of motif in Background56.6 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGAGGGCCTHTC---
--NNGCACCTTTCTCC
 G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PH0141.1_Pknox2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGAGGGCCTHTC-----
--AAGCACCTGTCAATAT
 G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAGAGGGCCTHTC
----AGGCCTAG-
 G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGAGGGCCTHTC
-NRRGGGTCTT--
 G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGAGGGCCTHTC-
----GGGGATTTCC
 G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGAGGGCCTHTC
--CNAGGCCT---
 G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAGAGGGCCTHTC-
----GGGAATTTCC
 G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGAGGGCCTHTC-
----GGGGATTTCC
 G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGGGCCTHTC
GCCTCAGGGCAT---
 A C G T A C G T G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGGGCCTHTC---
NNNTNGGGCGTATNNTN
 A C G T G T A C C G T A T C A G C T G A A C T G A C T G A T C G A G T C A G T C A C G T G A C T A C G T A G T C A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T