Information for 11-CATGTTCTTTAAT (Motif 11)

A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T
Reverse Opposite:
C G T A A G C T C A G T G T C A C G T A C G T A C A T G C T G A C G T A A G T C C G T A A C G T A C T G
p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.4 +/- 28.9bp
Average Position of motif in Background46.2 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:CATGTTCTTTAAT
-------TTTAAT
 A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CATGTTCTTTAAT-----
-NNTTCCTTTGATCTNNA
 A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATGTTCTTTAAT-----
-ATTTCCTTTGATCTATA
 A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PH0128.1_Otp/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATGTTCTTTAAT----
CNNATTAATTAATTNNN
 A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATGTTCTTTAAT-----
-NNTTCCTTTGATCTANA
 A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PH0051.1_Hoxa4/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATGTTCTTTAAT----
CNAGTTAATTAATAANN
 A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T A C G T A C G T A C G T A C G T
T G A C T C G A G T C A T C A G G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G C T C T G A C T G A G A C T G A T C

PB0197.1_Zfp105_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATGTTCTTTAAT---
NAAANTTATTGAANCAN
 A C G T A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATGTTCTTTAAT-----
-AATCCCTTTGATCTATC
 A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CATGTTCTTTAAT
NTNTTGTTGTTTGTN
 A C G T A C G T A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PH0136.1_Phox2b/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CATGTTCTTTAAT----
CNNNTTAATTAATTNNN
 A G T C G T C A C G A T A C T G A C G T A G C T G T A C A C G T A C G T A C G T G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G