Information for 10-AGGGCAGAAAGGCACT (Motif 10)

C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T
Reverse Opposite:
C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A G C T T C A G A G T C A G T C A G T C A C G T
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 10.9bp
Average Position of motif in Background69.4 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGGGCAGAAAGGCACT-
---GGAGAAAGGTGCGA
 C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T A C G T
A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

RARA/MA0729.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAGAAAGGCACT-
GAGGTCAAAAGGTCAATG
 A C G T C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGGCAGAAAGGCACT
AAAGGTCAAAAGGTCA--
 A C G T A C G T C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGGGCAGAAAGGCACT
ARGAGGMCAAAATGW----
 A C G T A C G T A C G T C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T A C G T A C G T

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGGGCAGAAAGGCACT------
CACAAGGGARWARGRCACCATGAGG
 A C G T A C G T A C G T C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G C A G T A C C T G A C T G A T A C G C T A G C T A G C T G A T C A G C G A T T C G A C T G A C T A G T C A G A G T C C G T A A G T C G T A C C T G A C G A T A C T G C T G A C T A G A T C G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAGAAAGGCACT
GAGGTCAAAAGGTCA--
 A C G T C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGGGCAGAAAGGCACT
AAGGTCAAAAGGTCAA-
 A C G T C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGGGCAGAAAGGCACT
--AAAACAAAGG----
 C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGGGCAGAAAGGCACT
--GGAACAAAGR----
 C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.50
Offset:9
Orientation:forward strand
Alignment:AGGGCAGAAAGGCACT---
---------AAGCACTTAA
 C G T A A C T G A C T G C T A G A G T C C T G A A C T G C G T A C G T A C G T A A C T G A C T G G T A C G T C A A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A