Information for 6-GTAGGRAGGTGCTGCT (Motif 9)

A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T
Reverse Opposite:
G C T A A C T G A G T C C G T A T A C G A G T C G T C A A T G C G A T C A G C T A G T C A G T C A T G C A C G T T G C A A T G C
p-value:1e-9
log p-value:-2.254e+01
Information Content per bp:1.707
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.0 +/- 19.0bp
Average Position of motif in Background30.1 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GTAGGRAGGTGCTGCT-----
------AGATGCTRCTRCCHT
 A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTAGGRAGGTGCTGCT--
--GCGGAGGTGTCGCCTC
 A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T A C G T A C G T
A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTAGGRAGGTGCTGCT
--SDGCAGGTGCNS--
 A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTAGGRAGGTGCTGCT
--AGGAAACAGCTG--
 A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T
A C G T A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GTAGGRAGGTGCTGCT
------AGCAGCTGCT
 A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GTAGGRAGGTGCTGCT
---GACAGGTGTN---
 A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GTAGGRAGGTGCTGCT
---NNCAGGTGTN---
 A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T
A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GTAGGRAGGTGCTGCT
----NNAGCAGCTGCT
 A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T
A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GTAGGRAGGTGCTGCT
---AACAGGTGT----
 A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GTAGGRAGGTGCTGCT
---GACAGCTGCAG--
 A T C G A C G T G T C A A T C G C T A G T C A G T C G A C T A G T A C G A C G T A C T G A T G C C G A T T C A G T G A C C G A T
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T