Information for 6-GCMACYTRGT (Motif 5)

T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T
Reverse Opposite:
T C G A G A T C G A C T T G C A T C A G T C A G A C G T C A T G A C T G A G T C
p-value:1e-13
log p-value:-3.116e+01
Information Content per bp:1.484
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif214.1
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets53.5 +/- 30.6bp
Average Position of motif in Background52.8 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCMACYTRGT-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCMACYTRGT-----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCMACYTRGT
ACCACTTAA-
 T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T
T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCMACYTRGT
ACCACTTAA-
 T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCMACYTRGT
TGACACCT---
 A C G T T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------GCMACYTRGT---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCMACYTRGT--
ACATGCTACCTAATAC
 A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCMACYTRGT---
YDGHTACAWTGTADC
 A C G T A C G T T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCMACYTRGT---
TWGHWACAWTGTWDC
 A C G T A C G T T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCMACYTRGT
MRSCACTYAA-
 A C G T T C A G T G A C G T A C T G C A A G T C A G T C A C G T C T G A C T A G A G C T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T