p-value: | 1e-22 |
log p-value: | -5.107e+01 |
Information Content per bp: | 1.795 |
Number of Target Sequences with motif | 31.0 |
Percentage of Target Sequences with motif | 3.56% |
Number of Background Sequences with motif | 143.9 |
Percentage of Background Sequences with motif | 0.30% |
Average Position of motif in Targets | 56.6 +/- 25.4bp |
Average Position of motif in Background | 48.5 +/- 33.1bp |
Strand Bias (log2 ratio + to - strand density) | -1.1 |
Multiplicity (# of sites on avg that occur together) | 1.06 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.77 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGCTAGACAA AGGTGHCAGACA- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 2 |
Score: | 0.76 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGCTAGACAA AGGTGNCAGACAG |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGCTAGACAA ATGCCAGACN- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 4 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGCTAGACAA --BCAGACWA |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGCTAGACAA --CCAGACAG |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 6 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGCTAGACAA---- CAAATCCAGACATCACA |
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PB0029.1_Hic1_1/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGCTAGACAA-- ACTATGCCAACCTACC |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGCTAGACAA-- --CCAGACRSVB |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCTAGACAA TTGCCAAG--- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGCTAGACAA ATGCCAACC-- |
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