Information for 2-KTWCAGCRCC (Motif 2)

C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C
Reverse Opposite:
C T A G A C T G G A C T C T A G G T A C G A C T T C A G G C A T G T C A G T A C
p-value:1e-550
log p-value:-1.267e+03
Information Content per bp:1.479
Number of Target Sequences with motif407.0
Percentage of Target Sequences with motif46.67%
Number of Background Sequences with motif489.4
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets51.3 +/- 17.3bp
Average Position of motif in Background50.6 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:KTWCAGCRCC
-CACAGN---
 C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:KTWCAGCRCC
---CAGCC--
 C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----KTWCAGCRCC--
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----KTWCAGCRCC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----KTWCAGCRCC--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:KTWCAGCRCC--
-GTCAGCANNTN
 C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C A C G T A C G T
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--KTWCAGCRCC
TGAGTCAGCA--
 A C G T A C G T C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KTWCAGCRCC--
NGTCAGCANTTT
 C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C A C G T A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:KTWCAGCRCC
--TCAGTCTT
 C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---KTWCAGCRCC--
CTGAGTCAGCAATTT
 A C G T A C G T A C G T C A T G C A G T C G T A A G T C C T G A C A T G G A T C C T G A T G A C G A T C A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T