Information for 10-CTGTGTTTAR (Motif 10)

A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A
Reverse Opposite:
A G C T A C G T C G T A C G T A C T G A A T G C C G T A A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.736e+01
Information Content per bp:1.903
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets31.6 +/- 27.8bp
Average Position of motif in Background41.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTGTGTTTAR-----
CTTTGTTTACTTTTN
 A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTTTAR
GCTGTGGTTT-
 A C G T A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTGTGTTTAR
CTGTGGTTTN
 A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTTTAR
GCTGTG-----
 A C G T A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTGTGTTTAR
---TGTTTAC
 A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A
A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTGTGTTTAR---
NNNNTTTGTTTACNNT
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

FOXP2/MA0593.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGTGTTTAR--
-TNTGTTTACTT
 A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A A C G T A C G T
A C G T G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTGTGTTTAR----
--NTGTTTAYATWW
 A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTGTGTTTAR--
NYYTGTTTACHN
 A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A A C G T A C G T
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTGTGTTTAR
---TGTTTAC
 A G T C A C G T A C T G A C G T A T C G A G C T A C G T A C G T C G T A C T G A
A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C