Information for 7-AAGGGCTAGC (Motif 13)

G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C
Reverse Opposite:
C T A G A G T C A C G T C G T A A C T G G T A C A G T C A T G C A G C T A C G T
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.850
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif72.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets43.0 +/- 24.2bp
Average Position of motif in Background50.3 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGGGCTAGC
-AGGCCTAG-
 G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGGGCTAGC
-AGGCCTNG-
 G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCTAGC---
ATAAGGGCGCGCGAT
 A C G T A C G T G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGGGCTAGC----
CAGGCCNNGGCCNN
 G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAGGGCTAGC--
-AAGGCAAGTGT
 G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGGGCTAGC
CAAGGHCANV-
 A C G T G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCTAGC---
ATAAAGGCGCGCGAT
 A C G T A C G T G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AAGGGCTAGC-
------CAGCC
 G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAGGGCTAGC
NTCAAGGTCA---
 A C G T A C G T A C G T G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGGGCTAGC
GAGSCCGAGC
 G T C A C T G A T A C G C T A G A C T G A G T C G C A T C G T A A C T G A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C