Information for 8-AGAGGGCAGCCAGCAA (Motif 6)

C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A
Reverse Opposite:
A C G T A C G T A T C G A G T C A C G T A T C G A C T G A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A C G T
p-value:1e-9
log p-value:-2.151e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.6 +/- 24.4bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGAGGGCAGCCAGCAA-
---TGGCAGNCTGCCAG
 C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A A C G T
A C G T A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGCAGCCAGCAA
CAAGATGGCGGC------
 A C G T A C G T C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGAGGGCAGCCAGCAA
TNNGGGCAG-------
 C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGAGGGCAGCCAGCAA
CAAAGGTCAG-------
 A C G T C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGAGGGCAGCCAGCAA
CAAGATGGCGGC------
 A C G T A C G T C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGGGCAGCCAGCAA--
GGAAGGAAGGAAGGAAGG
 C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------AGAGGGCAGCCAGCAA
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGGGCAGCCAGCAA
AGRGGTCA--------
 C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGGGCAGCCAGCAA
TGACANARRCCAGRC-
 C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGGGCAGCCAGCAA
TRAGGTCA--------
 C G T A A C T G C G T A A C T G A C T G A T C G G T A C G T C A A C T G A G T C A T G C G T C A A C T G A T G C C G T A C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T