Information for 8-MCTTGGGYWYCCRYRR (Motif 9)

G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G
Reverse Opposite:
A G T C A G C T C T A G A G T C C T A G C T A G C T G A C G A T C T G A A G T C A G T C A G T C C G T A C G T A A T C G A C G T
p-value:1e-13
log p-value:-3.090e+01
Information Content per bp:1.799
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 13.7bp
Average Position of motif in Background30.1 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--MCTTGGGYWYCCRYRR
NNNNTTGGGCACNNCN--
 A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----MCTTGGGYWYCCRYRR
GCACCCCTGGGTGCC-----
 A C G T A C G T A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:MCTTGGGYWYCCRYRR
-NGTGGGCAT------
 G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---MCTTGGGYWYCCRYRR
TGACCTTGAN---------
 A C G T A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:MCTTGGGYWYCCRYRR
NNNGGGGCGCCCCCNN
 G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---MCTTGGGYWYCCRYRR
TGACCTTGAV---------
 A C G T A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:7
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------MCTTGGGYWYCCRYRR-
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

EBF1/MA0154.3/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----MCTTGGGYWYCCRYRR
ANTCCCTNGGGAAT------
 A C G T A C G T A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-MCTTGGGYWYCCRYRR
WDNCTGGGCA-------
 A C G T G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----MCTTGGGYWYCCRYRR
BNTGDCCTTG-----------
 A C G T A C G T A C G T A C G T A C G T G T C A A T G C A C G T A C G T A C T G A C T G A C T G A G C T C G T A A G C T A G T C A G T C C T A G A G T C C T G A C T A G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T