Information for 20-GTTCTCTTGTTGG (Motif 19)

T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G
Reverse Opposite:
A T G C A G T C G T C A C T G A G T A C G T C A C G T A A T C G C G T A A C T G G T C A C G T A A T G C
p-value:1e-5
log p-value:-1.278e+01
Information Content per bp:1.838
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.7 +/- 21.3bp
Average Position of motif in Background54.3 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTTCTCTTGTTGG---
-TTCTATTTTTAGNNN
 T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTTCTCTTGTTGG-
--GCTATTTTTGGM
 T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTTCTCTTGTTGG
---CTATTTTTGG
 T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTTCTCTTGTTGG-
--KCTATTTTTRGH
 T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTTCTCTTGTTGG
NNGTANTGTTTTNC-
 A C G T A C G T T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTTCTCTTGTTGG
--GCTGTGGTTT-
 T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTTCTCTTGTTGG
-GTCTGTGGTTT-
 T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTTCTCTTGTTGG---
-NNNTGTTGTTGTTNG
 T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G A C G T A C G T A C G T
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTTCTCTTGTTGG-
--GCTATTTTTAGC
 T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTTCTCTTGTTGG
---CTGTGGTTTN
 T A C G A C G T A C G T A G T C A C G T A T G C A C G T A C G T A C T G A G C T A C G T A C T G A T C G
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G