Information for 13-GAGCTCHTGAGAG (Motif 11)

C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G C T A G T C C G T A C G T A A T C G C G T A A C T G A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.1 +/- 32.0bp
Average Position of motif in Background46.8 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GAGCTCHTGAGAG---
-----CTTGAGTGGCT
 C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGCTCHTGAGAG-
--GGTGYTGACAGS
 C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G A C G T
A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GAGCTCHTGAGAG---
------TTGAGTGSTT
 C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GAGCTCHTGAGAG--
-----CTYRAGTGSY
 C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGCTCHTGAGAG
-NGCTN-------
 C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAGCTCHTGAGAG--
-----BTBRAGTGSN
 C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0022.1_Gata5_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGCTCHTGAGAG---
TAAACTGATAAGAAGAT
 A C G T C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

ZBTB33/MA0527.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTCHTGAGAG
NAGNTCTCGCGAGAN
 A C G T A C G T C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAGCTCHTGAGAG-
------TTGACAGC
 C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGCTCHTGAGAG---
-AGATGKDGAGATAAG
 C T A G G T C A A C T G A G T C A C G T A T G C G A C T C G A T C T A G C T G A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G