Information for 11-CACCTTGTTAGGC (Motif 7)

A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C
Reverse Opposite:
T A C G A G T C G A T C A C G T C G T A T C G A A G T C C G T A C G T A C T A G A C T G A C G T C T A G
p-value:1e-12
log p-value:-2.839e+01
Information Content per bp:1.697
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif71.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets43.9 +/- 23.7bp
Average Position of motif in Background47.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CACCTTGTTAGGC-
--CCATATATGGNA
 A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C A C G T
A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CACCTTGTTAGGC----
--CTTTGTTATGCAAAT
 A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CACCTTGTTAGGC
TGACACCT--------
 A C G T A C G T A C G T A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CACCTTGTTAGGC----
--CATTGTTATGCAAAT
 A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACCTTGTTAGGC--
NCCGTTGCTANGNGN
 A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

LBX1/MA0618.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CACCTTGTTAGGC
---CTAATTAA--
 A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C
A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CACCTTGTTAGGC
--ACTAGTTAAC-
 A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CACCTTGTTAGGC
TCACACCT--------
 A C G T A C G T A C G T A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CACCTTGTTAGGC--
NNNACCTCATTATCNTN
 A C G T A C G T A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CACCTTGTTAGGC
--CTTTGT-----
 A G T C T G C A T A G C G A T C A C G T C G A T T A C G A C G T C G A T C G T A C T A G C T A G A G T C
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T