Information for 13-GGGAAGCTTTGAA (Motif 16)

C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A
Reverse Opposite:
C G A T A G C T T G A C T G C A T G C A C T G A C T A G T G A C G A C T A C G T G T A C G T A C G A T C
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.633
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif454.1
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets53.1 +/- 25.2bp
Average Position of motif in Background49.1 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GGGAAGCTTTGAA--
-----CCTTTGATGT
 C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGGAAGCTTTGAA
---AAGCTTG---
 C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GGGAAGCTTTGAA----
-------TTTGAAACCG
 C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGGAAGCTTTGAA--
-----CCTTTGAWGT
 C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGAAGCTTTGAA
-NGAAGC------
 C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGAAGCTTTGAA
---AAGGTGTGAA
 C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGGAAGCTTTGAA--
------ATTTGAATT
 C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGGAAGCTTTGAA----
---TNCCTTTGATCTTN
 C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGGAAGCTTTGAA-
---TAGGTGTGAAG
 C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A A C G T
A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGAAGCTTTGAA----
GAAAAGGTGTGAAAATT
 C T A G C A T G C A T G T G C A C T G A A C T G G A T C G A C T A C G T A C G T A C T G T C G A G C T A A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T