Information for 7-GGGGMHTYCCCVS (Motif 9)

C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
Reverse Opposite:
T A C G A T G C A C T G C T A G T C A G C T G A T G C A C G T A A C G T G A T C T A G C T G A C G T A C
p-value:1e-13
log p-value:-3.016e+01
Information Content per bp:1.591
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.77%
Number of Background Sequences with motif1250.2
Percentage of Background Sequences with motif2.64%
Average Position of motif in Targets52.3 +/- 26.3bp
Average Position of motif in Background49.9 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GGGGMHTYCCCVS
NGGGGATTTCCC--
 A C G T C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GGGGMHTYCCCVS
AGGGGAATCCCCT-
 A C G T C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GGGGMHTYCCCVS
GGGGATTCCCCC-
 C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GGGGMHTYCCCVS
GGGGATTTCC---
 C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GGGGMHTYCCCVS
AGGGGATTCCCCT-
 A C G T C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GGGGMHTYCCCVS
GGGGATTTCC---
 C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGGGMHTYCCCVS
GGGAATTTCC---
 C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GGGGMHTYCCCVS
GGGAATTTCC---
 C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:GGGGMHTYCCCVS
------TCCCCA-
 C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGGGMHTYCCCVS
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T C A T G A C T G A T C G C T A G T G C A G C A T A C G T A G C T A G T C A G T C G T A C T A C G A T G C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A